PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIS97859
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NF-YA
Protein Properties Length: 295aa    MW: 32977.9 Da    PI: 9.6034
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIS97859genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA84.22e-26127181258
  CBFB_NFYA   2 eplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                 p++VNaKQy++Il+RR+ Rak e e+kl  k rkp+lh SRh hA+rRpRg gGrF
   OIS97859 127 GPIFVNAKQYHGILRRRKFRAK-EMENKL-LKPRKPFLHLSRHLHAMRRPRGGGGRF 181
                69*******************9.566999.9*************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 295 aa     Download sequence    
MSMHTIFTKR NETATWWGSL VPQSVESFGH LKSASIEQPS KGDTTEFTTS SESQSGDSKS  60
SEKAEKLSNV LDGVSMKSSY MDYHGHFEPL IYAKYPYGEK CLGLFSAYGS QVSGRIMLPL  120
NLTSDEGPIF VNAKQYHGIL RRRKFRAKEM ENKLLKPRKP FLHLSRHLHA MRRPRGGGGR  180
FLNTRKMNES INDDTNGTTK TSNRKSQPTG SQNSEVLQSD HIGNFNSPKE TTSRMSCNSS  240
EVTSFYSRGN LDTYTVHNPK PSVQAFFDMM NTSHDILMGS NWGSAASDSC CNLNI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06510.34e-42NF-YA family protein