PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIS97882

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

ARR-B

Protein Properties

Length: 542aa MW: 60636.8 Da PI: 5.6826

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIS97882	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	81	1.3e-25	196	249	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r++Wt +LH++Fv+av+q+ G +kA Pk+il+lm+v+ Lt+e+v+SHLQkYRl OIS97882 196 KARVVWTVDLHQKFVKAVNQI-GFDKAGPKKILDLMGVPWLTRENVASHLQKYRL 249 68*****************.******************************8 PP
2	Myb_DNA-binding	41.5	3.1e-13	198	248	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r WT ++++++v+av+q G + +k+I mg +t++++ s++qky+ OIS97882 198 RVVWTVDLHQKFVKAVNQIGFDkaGPKKILDLMGvPWLTRENVASHLQKYR 248 678***********************************************7 PP
3	Response_reg	80.5	5.4e-27	25	133	1	109
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTES CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGak 95 vl+vdD+p+ +++l+++l+k y ev++ ++eal+ll+e++ +D+++ D++mp+mdG++ll++ e +lp+i+++ ge + + + ++ Ga OIS97882 25 VLVVDDDPTWLKILEKMLKKCSY-EVTTSGLAREALNLLRERKdgFDIVISDVNMPDMDGFKLLEHVGLEM-DLPVIMMSVDGETSRVMKGVQHGAC 119 89*******************.***********999999******************6644.8******************** PP EEEESS--HHHHHH CS Response_reg 96 dflsKpfdpeelvk 109 d+l Kp+ ++el++ OIS97882 120 DYLLKPIRMKELRN 133 *********987 PP

Sequence ? help Back to Top
Protein Sequence Length: 542 aa Download sequence
MMENSKTTAG FSSPRSDNFP AGLRVLVVDD DPTWLKILEK MLKKCSYEVT TSGLAREALN 60 LLRERKDGFD IVISDVNMPD MDGFKLLEHV GLEMDLPVIM MSVDGETSRV MKGVQHGACD 120 YLLKPIRMKE LRNIWQHVLR KRMHEARDIG NHEMDQFDEV WMLNGTELLS GKKRKDFDNE 180 KETSDSRCVD SSSMKKARVV WTVDLHQKFV KAVNQIGFDK AGPKKILDLM GVPWLTRENV 240 ASHLQKYRLY LTRLQKENEV KASFCGMKHP NVSSKENSPQ NPVDVCTDVI NDKCSGVSGD 300 EAIVQNGKAN IYESKVKGVV SMPVTEPRSV VGDNIGSKTS LSDPFGLINT DVKSLNCFTG 360 EAPQPQYKQD FKPRFPSENG LSNQPLPGMD CTQPTCSLNL VPSHEVRDRV SSKENKPSFF 420 KSISGLGKLS ALEAIQPVSH QINFHALEQI PTTTWSMTSQ NVDQNLVNAL QSTPGNLGED 480 ASIQGECFPA YNGLWNIQQF DYNDPQPISG GPTCLYDTLR FDYEYPNDSL EGVVLDQGLF 540 IV

Sequence ? help Back to Top

Protein Sequence Length: 542 aa Download sequence

MMENSKTTAG FSSPRSDNFP AGLRVLVVDD DPTWLKILEK MLKKCSYEVT TSGLAREALN  60
LLRERKDGFD IVISDVNMPD MDGFKLLEHV GLEMDLPVIM MSVDGETSRV MKGVQHGACD  120
YLLKPIRMKE LRNIWQHVLR KRMHEARDIG NHEMDQFDEV WMLNGTELLS GKKRKDFDNE  180
KETSDSRCVD SSSMKKARVV WTVDLHQKFV KAVNQIGFDK AGPKKILDLM GVPWLTRENV  240
ASHLQKYRLY LTRLQKENEV KASFCGMKHP NVSSKENSPQ NPVDVCTDVI NDKCSGVSGD  300
EAIVQNGKAN IYESKVKGVV SMPVTEPRSV VGDNIGSKTS LSDPFGLINT DVKSLNCFTG  360
EAPQPQYKQD FKPRFPSENG LSNQPLPGMD CTQPTCSLNL VPSHEVRDRV SSKENKPSFF  420
KSISGLGKLS ALEAIQPVSH QINFHALEQI PTTTWSMTSQ NVDQNLVNAL QSTPGNLGED  480
ASIQGECFPA YNGLWNIQQF DYNDPQPISG GPTCLYDTLR FDYEYPNDSL EGVVLDQGLF  540
IV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67710.1	1e-115	ARR-B family protein

Link Out ? help Back to Top
Ensembl	OIS97882