PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIS97906

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

NAC

Protein Properties

Length: 308aa MW: 35900.2 Da PI: 5.7804

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIS97906	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	68	2.7e-21	8	133	3	128
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvgl 102 p +rF Ptd el+ + Lkk ++g++l+ e i+ +iy Pw++ + eek yf s+ +k++++ kr +r+ ++g+Wka+ ++++ kg++vg OIS97906 8 PSVRFYPTDAELI-YLLKKFLKGESLPSECPIRLGEIYGDrPPWEISDH--PEEKIGYFISPLKKRKESHKRFRRTCANGTWKAQTGGDPIKNGKGTVVGF 105 789********.666777888889996669999986478*733..344556***********************9999*9*** PP NAM 103 kktLvfy..kgrapkgektdWvmheyrl 128 +k+ v+ + +++k k +W+m ey + OIS97906 106 RKSYVYRtrSSKESKQDKINWLMREYYV 133 **954457777889******75 PP

Sequence ? help Back to Top
Protein Sequence Length: 308 aa Download sequence
MSMVSRLPSV RFYPTDAELI YLLKKFLKGE SLPSECPIRL GEIYGDRPPW EISDHPEEKI 60 GYFISPLKKR KESHKRFRRT CANGTWKAQT GGDPIKNGKG TVVGFRKSYV YRTRSSKESK 120 QDKINWLMRE YYVGDDYFRE NNIPKQDFVL CRIKKNITER NRKNGVNMEE QEVAQVIEGM 180 LREPDYNSSQ SATIFQRHQI MSAEYAEQQD NYLRGLNKNS QILTTYDRDE ATLENHGANT 240 NRVYVMTKEA YGQLSLPGIQ EQYCAEADLN TDNSDFSDLN ADNSDFLELT LMSGIEDIVP 300 DDWWHQFY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04410.1	3e-17	NAC family protein

Link Out ? help Back to Top
Ensembl	OIS97906