PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIS97997
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family Trihelix
Protein Properties Length: 261aa    MW: 31535.8 Da    PI: 5.6732
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIS97997genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix82.84.5e-2635117186
  trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
               +W+ qe+++ + +r em++++ ++k++k lWe ++ km+e+g++rs++qCk+kw+nl +ryk ++++e +    +++++p++++l+
  OIS97997  35 QWSIQETKDFLMIRGEMDQNFMETKRNKLLWEVIATKMKEKGYNRSAEQCKCKWKNLVTRYKGCETMEAEA---QRKQFPFYNELQ 117
               7********************************************************************95...56689*****98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 261 aa     Download sequence    
MEGQPNLYHQ HQFVSQQNLL NIDTSGVGGG DRFPQWSIQE TKDFLMIRGE MDQNFMETKR  60
NKLLWEVIAT KMKEKGYNRS AEQCKCKWKN LVTRYKGCET MEAEAQRKQF PFYNELQAIF  120
MERMLRMEVE EEEYDEDSEE EKGCNKKKRK LKGKTSSSSS NVASGNLVGN LKEILDEFMN  180
KQMEMEMQWQ KEYERREEER KIKEMEWRQK MEALQNERLM MEKRWREREE QWKMREEARA  240
EKRDALITAL LNKLRSEDTS D
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1146151KKKRKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38250.17e-52Trihelix family protein