PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIS98026
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family WRKY
Protein Properties Length: 225aa    MW: 26130.3 Da    PI: 7.9358
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIS98026genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY79.34.1e-25113174159
               ---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
      WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
               +dDg++WrKYGqK++ ++++pr+Y+rCt++   gC++ k+v+r +e+p ++ +tY g+H+++
  OIS98026 113 VDDGHAWRKYGQKHILNAKYPRNYFRCTHKfdqGCEANKQVQRIQENPPLFRVTYYGHHTCK 174
               59***************************9999***************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 225 aa     Download sequence    
MESENYTQSD LEKLTEKLNR GRELTRRLRE MIKKPEADVG DVLTEDLVGK IMSSFSETIS  60
ILRSNEFSEV SQIVKSTEDS SGSCKTSSMK DRRGRYKRRK TLETTIKETS TLVDDGHAWR  120
KYGQKHILNA KYPRNYFRCT HKFDQGCEAN KQVQRIQENP PLFRVTYYGH HTCKTFPKVS  180
QMICDSPTHD EDSSVLLNFN STNNHHHFLD LMVGTVEFAD LSFEF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.18e-43WRKY family protein