PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIS98171

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

ARR-B

Protein Properties

Length: 566aa MW: 62722.9 Da PI: 6.918

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIS98171	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	86.3	3.1e-27	321	374	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k +++WtpeLH++Fv+aveqL G+++A+P++ilelmkv+gLt+++v+SHLQk+R+ OIS98171 321 KMKVDWTPELHKKFVKAVEQL-GIDQAIPSRILELMKVEGLTRHNVASHLQKFRM 374 5689***************.******************************8 PP
2	Myb_DNA-binding	43.4	7.6e-14	324	373	2	48
SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 WT+e+++++v+av+qlG + +++I + m +g+t+ ++ s++qk++ OIS98171 324 VDWTPELHKKFVKAVEQLGIDqaIPSRILELMKvEGLTRHNVASHLQKFR 373 57**********************************************97 PP
3	Response_reg	31.6	8.6e-12	20	126	1	109
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEH.HHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTE CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdG.lellkeireeepklpiivvtahgeeedalealkaGa 94 vl+ d++ + ++ +r+ le+ +y +v ++ d eal + k ++l ++ + + dG l++l+ ++ +lp i+v++ + +++ +++ Ga OIS98171 20 VLLLDKDCNSASEMRSRLEQMEY-IVYVFCDENEALSAISSKSevFHLAIVEVTAGNRDGgLKFLT---SAR-DLPTIMVSGIHSISTMMKCIAHGA 111 79999****************.***********777778********665155554...444.699*9999******** PP SEEEESS--HHHHHH CS Response_reg 95 kdflsKpfdpeelvk 109 +fl Kp + ++l++ OIS98171 112 VEFLQKPLSDDKLRN 126 **********987 PP

Sequence ? help Back to Top
Protein Sequence Length: 566 aa Download sequence
MVCTENELLG WKDFPKGLKV LLLDKDCNSA SEMRSRLEQM EYIVYVFCDE NEALSAISSK 60 SEVFHLAIVE VTAGNRDGGL KFLTSARDLP TIMVSGIHSI STMMKCIAHG AVEFLQKPLS 120 DDKLRNIWQH VVHKAFNSGG KNVSESLKPV KESLLSMLEL QPVKSEVKNE ADNENSNGAE 180 PLTSVVENQK ELPPYCDKYP APSTPQQKQG VRSVDDGDFQ DHTILSTEQD SGVNEGDTKS 240 VETTCCDSVA ETTVLADSPG RLGEAITKEE HDFAADQKME DHIATCSRSN DCTGNGSTRS 300 ADSSKASGLH SSSGTKANKK KMKVDWTPEL HKKFVKAVEQ LGIDQAIPSR ILELMKVEGL 360 TRHNVASHLQ KFRMQRRQIL PKEDEKRWPR PQPRDSVQRS YYPHKPVMAF PTYHSNHAPA 420 SGQFYPAWVP PGNYPNGARI WGSPYYPGWR PSETWHWTPH PGLCADVWGC PVTPPSFGSC 480 PPYPQNASGL HKAVGIQNRY SILEKSLDLQ PAEEVIDKVV KEAINKPWLP LPLGLKPPST 540 ESVLDALSKQ GISTVPPRIT GSFRPH

Sequence ? help Back to Top

Protein Sequence Length: 566 aa Download sequence

MVCTENELLG WKDFPKGLKV LLLDKDCNSA SEMRSRLEQM EYIVYVFCDE NEALSAISSK  60
SEVFHLAIVE VTAGNRDGGL KFLTSARDLP TIMVSGIHSI STMMKCIAHG AVEFLQKPLS  120
DDKLRNIWQH VVHKAFNSGG KNVSESLKPV KESLLSMLEL QPVKSEVKNE ADNENSNGAE  180
PLTSVVENQK ELPPYCDKYP APSTPQQKQG VRSVDDGDFQ DHTILSTEQD SGVNEGDTKS  240
VETTCCDSVA ETTVLADSPG RLGEAITKEE HDFAADQKME DHIATCSRSN DCTGNGSTRS  300
ADSSKASGLH SSSGTKANKK KMKVDWTPEL HKKFVKAVEQ LGIDQAIPSR ILELMKVEGL  360
TRHNVASHLQ KFRMQRRQIL PKEDEKRWPR PQPRDSVQRS YYPHKPVMAF PTYHSNHAPA  420
SGQFYPAWVP PGNYPNGARI WGSPYYPGWR PSETWHWTPH PGLCADVWGC PVTPPSFGSC  480
PPYPQNASGL HKAVGIQNRY SILEKSLDLQ PAEEVIDKVV KEAINKPWLP LPLGLKPPST  540
ESVLDALSKQ GISTVPPRIT GSFRPH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18020.3	1e-132	ARR-B family protein

Link Out ? help Back to Top
Ensembl	OIS98171