PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIS98187
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family SRS
Protein Properties Length: 200aa    MW: 22957.5 Da    PI: 8.3918
Description SRS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIS98187genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF702185.62e-5791484154
    DUF702   4 gtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasaaeaaskrkrelkskkqsalsstklssaeskkeletss 104
                +++CqdCGnqakkdC + RCRtCCks+gf+C+thvkstW+p+++rr r++ l++ +++++++++++ + ++++            + + ++     e ++
  OIS98187   9 SNSRCQDCGNQAKKDCPYLRCRTCCKSQGFQCQTHVKSTWIPVSRRRPRHHLLHTIQQQQQQQQQKQLQVNPKR-----------YRENDNNLAAGGEEED 98 
               6789*********************************************9999988666654443333333333...........2333333444567788 PP

    DUF702 105 lPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGlee 154
               lP+e+s +avfrcvrvss d+  +++aYqt+v+i+GhvfkGiLydqG+e+
  OIS98187  99 LPTELSLPAVFRCVRVSSTDNVVDQYAYQTSVKIAGHVFKGILYDQGPET 148
               ************************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 200 aa     Download sequence    
MMREEGISSN SRCQDCGNQA KKDCPYLRCR TCCKSQGFQC QTHVKSTWIP VSRRRPRHHL  60
LHTIQQQQQQ QQQKQLQVNP KRYRENDNNL AAGGEEEDLP TELSLPAVFR CVRVSSTDNV  120
VDQYAYQTSV KIAGHVFKGI LYDQGPETET HYTNMARESS SNGFQQEQLT TNSTQPLPSY  180
PSPFNNFMPG TQFFQYPKSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75520.15e-53SRS family protein