PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIS98305
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family B3
Protein Properties Length: 170aa    MW: 19273.4 Da    PI: 10.6883
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIS98305genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B365.39.3e-2134130295
               EEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEE.TTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EEE CS
        B3   2 fkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltled.esgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvvk 95 
               +kvl++sdv+++gr+vlpk+ ae+h  +++++ ++ + +ed  ++r+W++k+++  ++ks++y+l+ ++ +Fv+angL+e Df+v++   + ++++++++
  OIS98305  34 QKVLKQSDVGSLGRIVLPKREAETHlpQLESRDGISIAMEDiGTSRVWNMKYRFwpNNKSKMYLLE-NTGDFVRANGLQEDDFIVIY--ADiKCGKYLIR 130
               79*************************999999********7778*******99777777777777.********************..45588887776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 170 aa     Download sequence    
MCRFKFRVNV LQISVVYGLR QASKTEKNLK FLLQKVLKQS DVGSLGRIVL PKREAETHLP  60
QLESRDGISI AMEDIGTSRV WNMKYRFWPN NKSKMYLLEN TGDFVRANGL QEDDFIVIYA  120
DIKCGKYLIR GVKVRQNGPK SEGKKPAKKS HRDLSSTAAS ISSPVAQAVR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24650.19e-75B3 family protein