PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIS98326

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

NAC

Protein Properties

Length: 228aa MW: 26217.6 Da PI: 9.011

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIS98326	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	146.2	1.7e-45	5	135	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkge 98 pGfrF Pt+eel+++yL++k+egk+ el++vi+ v iy+++Pw+Lp+ ++ +++++w+fF++r++++a+g r+ r+t+sgyWkatg+ + v+s++++ OIS98326 5 SPGFRFYPTEEELISFYLHHKLEGKRPELDRVIPVVTIYSLDPWHLPNlpgeSCMGDTEQWFFFVPRQEREARGGRPCRTTTSGYWKATGSPTYVYSSESK 105 69*************************999**********9657764445778************************************** PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128 ++g+kk++vfykg+ap+g+kt+W m+eyr+ OIS98326 106 VIGVKKSMVFYKGKAPTGRKTKWKMNEYRA 135 **************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 228 aa Download sequence
MVEISPGFRF YPTEEELISF YLHHKLEGKR PELDRVIPVV TIYSLDPWHL PNLPGESCMG 60 DTEQWFFFVP RQEREARGGR PCRTTTSGYW KATGSPTYVY SSESKVIGVK KSMVFYKGKA 120 PTGRKTKWKM NEYRAIEQET STSSSFSIPK LRHEMSLCRV YVVSGSFRAF DRRPVATVTR 180 DTAAVKNQEL AADRDNISSS ISVKNESKSY NIVESDFENV NGWEQINW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G22380.1	8e-85	NAC family protein

Link Out ? help Back to Top
Ensembl	OIS98326