PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIS98702
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 217aa    MW: 23920.9 Da    PI: 4.9867
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIS98702genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.84.9e-1762112155
       AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
               + y+GVr +  + +Wv+e+r+p   +k+ r++lg++ tae+Aa+a++ a+ +l+g
  OIS98702  62 PVYRGVRKRN-SDKWVSEVREP---NKKSRIWLGTYPTAEMAARAHDVAAIALRG 112
               68*****888.7******9998...347*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 217 aa     Download sequence    
MDISHSYCCD PLPTASLSPV SNNSSSCINR ARADLSEEEV MLASNNPKKP AGRKKFQETR  60
HPVYRGVRKR NSDKWVSEVR EPNKKSRIWL GTYPTAEMAA RAHDVAAIAL RGRSACLNFA  120
DSVSKLPIPA STDAKDIQRA AAEAAEAFRP SDQSERVSGE FAEMPESNNF FMDEEALFCM  180
PGLLTDMAEG LMLPPPNYVE VGDNVEAADM TLWSYSV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25490.15e-70ERF family protein