PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIS98703
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 214aa    MW: 23755.9 Da    PI: 7.8877
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIS98703genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.41.5e-1758108155
       AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
               + y+GVr++  + +Wv+e+r p   +k+ r++lg++ tae+Aa+a++ a+ +l+g
  OIS98703  58 PVYRGVRRRN-SDKWVCEVRQP---NKKSRIWLGTYHTAEMAARAHDVAAIALRG 108
               68*****888.8******8887...347*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 214 aa     Download sequence    
MDIIRSYYSD SLTESSSLSD SSSSPCNRAN LSDVEVLLAS NNPKKRAGRK KFRETRHPVY  60
RGVRRRNSDK WVCEVRQPNK KSRIWLGTYH TAEMAARAHD VAAIALRGRS ACLNFADSVW  120
KLPIPASSEA KDIQRAAAEA AEAFRPSEPE AVSGKSCAVT PESNKFFMDE EALFCMPGLL  180
ANMAEGLMLP PPHYVEAGDY VEAAADMHLW SYII
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25490.16e-68ERF family protein