PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIS98704
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 218aa    MW: 24005.9 Da    PI: 5.6922
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIS98704genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.84.9e-1758108155
       AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
               + y+GVr +  + +Wv+e+r+p   +k+ r++lg++ tae+Aa+a++ a+ +l+g
  OIS98704  58 PVYRGVRKRN-SDKWVSEVREP---NKKSRIWLGTYPTAEMAARAHDVAAIALRG 108
               68*****888.7******9998...347*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 218 aa     Download sequence    
MDIFRSYYSD SLTESSSLAE NSSSPCNRAI LSDEEVLLAS NNPKKRAGRK KFQETRHPVY  60
RGVRKRNSDK WVSEVREPNK KSRIWLGTYP TAEMAARAHD VAAIALRGRS ACLNFADSVS  120
KLPIPASTDA KDIQRAAAEA AEAFRPSESE AVSGESCGGT THETPESNKL FMDEEALFCM  180
PGLLASMAEG LMLPPPHYIE VGDYVEAAAD MHLWSYTI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25490.18e-66ERF family protein