PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIS98859
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family bHLH
Protein Properties Length: 247aa    MW: 28403.6 Da    PI: 9.9456
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIS98859genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH20.68.1e-0786132455
               HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
       HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
               +h + Er RR++ ++++  L +llP       +K +K +i++ A   I++Lq
  OIS98859  86 KHMIKERIRREKQKQSYLDLHKLLPMG-----TKGEKNAIVQTAASRIQELQ 132
               68899********************97.....7******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 247 aa     Download sequence    
MEEFFQVQSS QANNGEVLWF ENEAFLVNQS AFVSFRNQSI EGFGVSGYGN VSANHRNMNK  60
RMMEFLKKSW SPKIGEVKME REKVHKHMIK ERIRREKQKQ SYLDLHKLLP MGTKGEKNAI  120
VQTAASRIQE LQKYKGSLKK RNDELQMILA DSKKEEFEKA KIKVKINYPI SGVDSMLEVL  180
KCLKNCGTKA NAIQSSFSQQ EFSSILEIET KIGAAEVEKA VQNTLFETER NFRAHQLPMT  240
WLASATE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43650.18e-41bHLH family protein