PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIS99026
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 236aa    MW: 26421.9 Da    PI: 8.453
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIS99026genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.61.8e-19104154255
       AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
               +y+GVr+++ +g+++AeIrdp +ng  +r++lg++ t eeAa a+++a+ +++g
  OIS99026 104 HYRGVRRRP-WGKFAAEIRDPAKNG--ARVWLGTYETDEEAAIAYDKAAYRMRG 154
               7********.***********9987..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 236 aa     Download sequence    
MNQPIYTELL PANLLGDFPV YRRNSSFSRL IPCLTETWGE LPLKVDDSED MVIYTLLKDA  60
LNVGWSPFNF TAGEVKSELR EEEPVVCPAE TTAAPATESP RGRHYRGVRR RPWGKFAAEI  120
RDPAKNGARV WLGTYETDEE AAIAYDKAAY RMRGSKAHLN FPHRIGLNEP EPVRVTAKRR  180
ASPEPASSSE NSSVKRRRKT VAAEKSEAVE VESKSNVLQV GCQVELLTRG HQLLVS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1178199KRRASPEPASSSENSSVKRRRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17500.17e-48ERF family protein