PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIS99204
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family bHLH
Protein Properties Length: 178aa    MW: 20562.4 Da    PI: 8.4119
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIS99204genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.92.4e-101663655
              HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
       HLH  6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55
              + +E++RR+++++ +++L +llP+ a   +++ l   + L  A++YIksL+
  OIS99204 16 KYVEKNRRNNMKNLYNQLYSLLPNhA---SKETLALPDQLDAATNYIKSLE 63
              568*********************55...7777****************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 178 aa     Download sequence    
MESGLRSNSA PKLERKYVEK NRRNNMKNLY NQLYSLLPNH ASKETLALPD QLDAATNYIK  60
SLETKLEKNK TYLEKLRISC RKRPRSFNAT DSEPSSSTEL LIPQIEFHEM SPTMFVVLIT  120
GLDNLATFYN IIWLLHEEGV EVVYSNFSLN GNSTLQISLE TKMDRKSTME FRATTLFD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.12e-24bHLH family protein