PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIS99267
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 261aa    MW: 27846.1 Da    PI: 10.0606
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIS99267genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP266.26.5e-212979256
       AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
              +y+GVr ++ +gr++AeIrdp   gk+ r++lg+f+taeeAaka++aa+++++g+
  OIS99267 29 HYRGVRKRP-WGRYAAEIRDP---GKKSRVWLGTFDTAEEAAKAYDAAAREFRGA 79
              6********.**********8...557*************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 261 aa     Download sequence    
MAPKQQGGAV AVAVTAAVGK VNGISKEVHY RGVRKRPWGR YAAEIRDPGK KSRVWLGTFD  60
TAEEAAKAYD AAAREFRGAK AKTNFPPPEE EILKIAQNNL GVKMNKNVND NNNRSPSQSS  120
TVESSSGDRL SPAVMVDSSP LDLSLGVKFP FQNHQFRTSP ISGGFSGCGF TGATPAVNHH  180
MYYLEALARA GVINLEKHQQ RKTVDFLGGK GGHGGSSGGS GSGTQSESDS SSVIDFMRND  240
VKPTTRTGLN LDLNFPPPEN V
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44210.18e-27ERF family protein