PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIS99378
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family MYB_related
Protein Properties Length: 83aa    MW: 9903.22 Da    PI: 10.0651
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIS99378genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like20.97.8e-072268153
   G2-like  1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkY 53
              k+r rWt+e H+rF+ea++   G   A  ++i e+++ k  t  +++SH Qk+
  OIS99378 22 KQRERWTEEEHNRFLEALKLH-GR--A-WQRIEEHIGTK--TAVQIRSHAQKF 68
              79****************866.43..3.48999999988..889999**9998 PP
2Myb_DNA-binding56.66e-182468147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     r rWT+eE+ ++++a k++G   W +I +++g ++t+ q++s+ qk+
         OIS99378 24 RERWTEEEHNRFLEALKLHGRA-WQRIEEHIG-TKTAVQIRSHAQKF 68
                     78******************88.*********.************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 83 aa     Download sequence    
MDPYSSGEEL VVKTRKPYTI TKQRERWTEE EHNRFLEALK LHGRAWQRIE EHIGTKTAVQ  60
IRSHAQKFFT KVISSFSPYA YFS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46830.14e-40MYB_related family protein