PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIS99428
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 240aa    MW: 26737 Da    PI: 4.6265
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIS99428genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.31.9e-18132182255
       AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
               +y+GVr ++ +g+++AeIrdp +ng  +r++lg++ tae+Aa a+++a+ +++g
  OIS99428 132 HYRGVRVRP-WGKFAAEIRDPAKNG--ARVWLGTYETAEDAAFAYDKAAFRMRG 182
               8********.***********9987..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 240 aa     Download sequence    
MYANCEVDND FAILESIRLH LLEDWEAPLT SSDNSTTSDL SRSNSIESNM FPNCLPNEFD  60
YTADMFFNDI FNEGIVGYGF EPASEFTLPT IKLEPEMTVQ SPEIWNLPEF VAPPETAAEV  120
KLEPPAPPKA KHYRGVRVRP WGKFAAEIRD PAKNGARVWL GTYETAEDAA FAYDKAAFRM  180
RGSRALLNFP LRINSGEPDP IRVGSKRSSM SPQYSSSSSS SSPPMKRGKK VAQETELVAL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47220.18e-42ERF family protein