PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIS99522
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family MYB_related
Protein Properties Length: 178aa    MW: 20778.6 Da    PI: 4.7713
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIS99522genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding47.54e-151461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+W+  Ed+ll +++k+ G g+W++ ++  g+ R++k+c++rw +yl
         OIS99522 14 KGPWSSKEDLLLTNYIKENGEGQWRSLPKNAGLLRCGKSCRLRWMNYL 61
                     79******************************99************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 178 aa     Download sequence    
MGRKPCCVKE GLRKGPWSSK EDLLLTNYIK ENGEGQWRSL PKNAGLLRCG KSCRLRWMNY  60
LRPGIKRGNF SQDEEDLIVR LHSLLEADVE NKENEMKLEE VSFFPRDLDF GKLLEGDANL  120
DEFLIQESSY ISNKHSMLMN ESMLEKVYEE YLLLLSENCY LQDDHQKEQN LPVNVSDQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G06180.19e-41MYB family protein