PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIS99570

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

Nin-like

Protein Properties

Length: 1017aa MW: 111895 Da PI: 5.4225

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIS99570	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	92.4	3.3e-29	617	668	1	52
RWP-RK 1 aekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 aek+isle+l++yF++++kdAAk+Lgvc+T++KriCRq+GI+RWP+Rki+++ OIS99570 617 AEKTISLEVLQQYFAGSLKDAAKSLGVCPTTMKRICRQHGISRWPSRKINKV 668 589***********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1017 aa Download sequence
MSEPEEEMNH MFRSKPKDFL PPPPPPPPPT QHTVAVENQN QREPSLMMDL DLDLDASWSF 60 DQIFAAAAAS NNPMSPFLVS TTASEQPCSP LWAFSDENED NKPSTGNALS APSLRFSSYP 120 RFLTYTGDHE AAAETLSVAD DKKRIPPPIL GLTPLDYLDG SCIIKERMTQ ALRYLKESTG 180 ERVLAQVWAP VKNGGRYMLT TSGQPFVLDP DCNGLHQYRM VSLMYMFAVD GETDGVLGLP 240 GRVYRKKLPE WTPNVQYYSS KEFPRLNHAL HYNVRGTLAL PVFEPSGQSC LGVLEIIMTS 300 QKINYAPEVD RVCKALEAVN LKSSEILDHP NTQICNEGRQ NALVEILEIL TAVCETYKLP 360 LAQTWVPCRH RSVLADGGGL KKSCSSFDGS CMGQVCMSTT DVSFYVVDAH MWGFREACAE 420 HHLQKGQGVA GRAYASQKSC FCEDIRLFCK TEYPLVHYAR LFGLSSCFAI CLRSTYTGND 480 DYVLEFFLPP NDGDYNDQLA LLNSLLLTMK QHFRSLRVAS GEELEHDWGS VEVIKASMED 540 KLGSRLESVP TTKSLPQPAS EVNGREPPDL MEEQQSVELN VAKVAEGVNG TAEAHNHASF 600 SENKGAGKKS ERKRGKAEKT ISLEVLQQYF AGSLKDAAKS LGVCPTTMKR ICRQHGISRW 660 PSRKINKVNR SLSKLKRVIE SVQGADGTFS LTSLAPNSLP VAVGSISWPA GMNGSPCKAS 720 EYHEERNEFS NHGTPGSHEE AEPSNQMLGS RIIGSEELSP KQNGFVREGS HRSRTGSGSR 780 EESAGTPTSH GSCQGSPFPA NESSPQNELV NSPTQESSVK VGGSMEPARQ TTGEINLSTA 840 FLMPGPYIPE HTQQLFGGML VEDAGSSHDL RNLCPAGDAM FDDRVPEYSW TNPPCSNGIA 900 KDQVSLPAEN MPQFSTRPEV TSVTIKATYR EDIIRFRLLL SSGLFKLKEE VAKRLKLEVG 960 TFDIKYLDDD HEWVLIACDA DLQECVDISR SSGSNVVRLL VHDIMPNLGS SCESSGE

Sequence ? help Back to Top

Protein Sequence Length: 1017 aa Download sequence

MSEPEEEMNH MFRSKPKDFL PPPPPPPPPT QHTVAVENQN QREPSLMMDL DLDLDASWSF  60
DQIFAAAAAS NNPMSPFLVS TTASEQPCSP LWAFSDENED NKPSTGNALS APSLRFSSYP  120
RFLTYTGDHE AAAETLSVAD DKKRIPPPIL GLTPLDYLDG SCIIKERMTQ ALRYLKESTG  180
ERVLAQVWAP VKNGGRYMLT TSGQPFVLDP DCNGLHQYRM VSLMYMFAVD GETDGVLGLP  240
GRVYRKKLPE WTPNVQYYSS KEFPRLNHAL HYNVRGTLAL PVFEPSGQSC LGVLEIIMTS  300
QKINYAPEVD RVCKALEAVN LKSSEILDHP NTQICNEGRQ NALVEILEIL TAVCETYKLP  360
LAQTWVPCRH RSVLADGGGL KKSCSSFDGS CMGQVCMSTT DVSFYVVDAH MWGFREACAE  420
HHLQKGQGVA GRAYASQKSC FCEDIRLFCK TEYPLVHYAR LFGLSSCFAI CLRSTYTGND  480
DYVLEFFLPP NDGDYNDQLA LLNSLLLTMK QHFRSLRVAS GEELEHDWGS VEVIKASMED  540
KLGSRLESVP TTKSLPQPAS EVNGREPPDL MEEQQSVELN VAKVAEGVNG TAEAHNHASF  600
SENKGAGKKS ERKRGKAEKT ISLEVLQQYF AGSLKDAAKS LGVCPTTMKR ICRQHGISRW  660
PSRKINKVNR SLSKLKRVIE SVQGADGTFS LTSLAPNSLP VAVGSISWPA GMNGSPCKAS  720
EYHEERNEFS NHGTPGSHEE AEPSNQMLGS RIIGSEELSP KQNGFVREGS HRSRTGSGSR  780
EESAGTPTSH GSCQGSPFPA NESSPQNELV NSPTQESSVK VGGSMEPARQ TTGEINLSTA  840
FLMPGPYIPE HTQQLFGGML VEDAGSSHDL RNLCPAGDAM FDDRVPEYSW TNPPCSNGIA  900
KDQVSLPAEN MPQFSTRPEV TSVTIKATYR EDIIRFRLLL SSGLFKLKEE VAKRLKLEVG  960
TFDIKYLDDD HEWVLIACDA DLQECVDISR SSGSNVVRLL VHDIMPNLGS SCESSGE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24020.1	0.0	Nin-like family protein

Link Out ? help Back to Top
Ensembl	OIS99570