PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIS99809

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

NAC

Protein Properties

Length: 457aa MW: 51506 Da PI: 7.181

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIS99809	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	114.2	1.3e-35	50	193	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk.......lelee....vikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk........sg 81 lp+G++F+Ptd+el+ e+L++kv +kk + + +i+ +i++++P++Lp v+ + + +fF++ +k+y+tg+rk+r+++ + OIS99809 50 LPAGVKFDPTDQELI-EHLEAKVVSKKeskshplI---DefipTIEGEdGICYTHPEKLP-GVTRDGLSRHFFHRPSKAYTTGTRKRRKIQtecdlqggET 145 799**********.9999999888856665443...143334766646******.555666799**************7333455554477 PP NAM 82 yWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 +W++tgk+++v++ +g+++g+kk+Lv+y g+++k+ekt+Wvmh+y+l OIS99809 146 RWHKTGKTRPVMV-NGKQKGCKKILVLYtnFGKNRKPEKTNWVMHQYHL 193 8********.999*******5547999999*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 457 aa Download sequence
MNKSSSSHQL GSISSCDLID AKLEEHQLCG SKQCPGCGQK LEGKPDWVGL PAGVKFDPTD 60 QELIEHLEAK VVSKKESKSH PLIDEFIPTI EGEDGICYTH PEKLPGVTRD GLSRHFFHRP 120 SKAYTTGTRK RRKIQTECDL QGGETRWHKT GKTRPVMVNG KQKGCKKILV LYTNFGKNRK 180 PEKTNWVMHQ YHLGQNEEER EGELVVSKIF YQTQPRQCNT STSWSNNHER SISTGDHSGS 240 GSCYSSKEMN NINPNSHSHR DELSAAVGAA MSSNYNTVNV QQLKADHFSF LPFRRNFDEA 300 GIMDAETSMA RRDDQAAGTC EEPESQRQHP SHHVTHEPSH QHQHHHQNQN ATTTAFNNIS 360 RPSPPISAII APPPPLHHTS AILDHDSFHV PRNYNFQQQQ QHHKVLGGRS TSGLEELIMG 420 CTSTDIKEES SLTNPQEADW LKYSSFWPDP KNTDHHE

Sequence ? help Back to Top

Protein Sequence Length: 457 aa Download sequence

MNKSSSSHQL GSISSCDLID AKLEEHQLCG SKQCPGCGQK LEGKPDWVGL PAGVKFDPTD  60
QELIEHLEAK VVSKKESKSH PLIDEFIPTI EGEDGICYTH PEKLPGVTRD GLSRHFFHRP  120
SKAYTTGTRK RRKIQTECDL QGGETRWHKT GKTRPVMVNG KQKGCKKILV LYTNFGKNRK  180
PEKTNWVMHQ YHLGQNEEER EGELVVSKIF YQTQPRQCNT STSWSNNHER SISTGDHSGS  240
GSCYSSKEMN NINPNSHSHR DELSAAVGAA MSSNYNTVNV QQLKADHFSF LPFRRNFDEA  300
GIMDAETSMA RRDDQAAGTC EEPESQRQHP SHHVTHEPSH QHQHHHQNQN ATTTAFNNIS  360
RPSPPISAII APPPPLHHTS AILDHDSFHV PRNYNFQQQQ QHHKVLGGRS TSGLEELIMG  420
CTSTDIKEES SLTNPQEADW LKYSSFWPDP KNTDHHE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29230.1	1e-160	NAC family protein

Link Out ? help Back to Top
Ensembl	OIS99809