PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT00309

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

STAT

Protein Properties

Length: 687aa MW: 77133.9 Da PI: 5.1847

Description

STAT family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT00309	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	STAT	191.9	6.9e-60	206	325	1	120
STAT 1 ldvvllnalgqpvekdvevvasLlyadsglvveksddaeapLLisydGvefssedrplkllrGrasfklkisqLsskcdnrLfrikfeipklkkypfleav 101 ldv+l+ +++p++ +vevvasL+yad+g++vek+ d+eapLL++ydG+e++s+drp+k++ GrasfklkisqLsskcdnrLf+i+feipk+ +ypfle++ OIT00309 206 LDVTLMGNFSRPITEEVEVVASLVYADDGAPVEKPVDDEAPLLTNYDGIEYASSDRPSKVISGRASFKLKISQLSSKCDNRLFCIRFEIPKMGNYPFLEVF 306 89************************************************************************************************* PP STAT 102 skpirCisrsrntrssslt 120 s+pirCisr+rntr++sl+ OIT00309 307 SRPIRCISRNRNTRAASLM 325 ************99876 PP

Sequence ? help Back to Top
Protein Sequence Length: 687 aa Download sequence
MGIQDYGFLE DLQVEFKDYD ATNGIFLCFW FYLNKASTLP STILLQNHSD VTSHAPFLLL 60 DEKKRLLLYP LLTSWREDVY ATSESEFPTK KWVHVGCEVT KNLLRLYLDG EIVGEKSLTS 120 SLNNDSVSDS SEISFPCISG KGSQLDGYVY SAELLPVVSS IKNHYVKDPP VQLSIDSSSA 180 YEIEEDTDGV WSIVGGKASC RRNFSLDVTL MGNFSRPITE EVEVVASLVY ADDGAPVEKP 240 VDDEAPLLTN YDGIEYASSD RPSKVISGRA SFKLKISQLS SKCDNRLFCI RFEIPKMGNY 300 PFLEVFSRPI RCISRNRNTR AASLMLRKSS LGIHLLNGSQ SPILEDGSSD LPCIVREAKQ 360 SPSSKRVKLG QEKLCANFKD DFVLQQANGE SKSHSWISED NNAYPNSLVA RPVSHGGAQN 420 FSSDSENSET TNSGIDDFPS NRDPISDVDV FKYCLGDPNE RRLLLKEMAM SAKEEELATF 480 AERVSLFSGC SHHRHQISIS KRLIEEGIKC WNFISDDNHH VLWENLVSGL QEHFLKMTFG 540 RTRSLTHQDF DLLRRVSGCQ DLVSQDNFEK LWCWLYPIAF TLSQQCITSL WGSAPPVWIE 600 GFITKEEAES SLRGQDPGTF ILRFPTSRSW PHPDSGNLVA TYVGSDYTIH HRLVSLDFIY 660 SSGGKGMTIK PIQDMLLEQP ELGRLGR

Sequence ? help Back to Top

Protein Sequence Length: 687 aa Download sequence

MGIQDYGFLE DLQVEFKDYD ATNGIFLCFW FYLNKASTLP STILLQNHSD VTSHAPFLLL  60
DEKKRLLLYP LLTSWREDVY ATSESEFPTK KWVHVGCEVT KNLLRLYLDG EIVGEKSLTS  120
SLNNDSVSDS SEISFPCISG KGSQLDGYVY SAELLPVVSS IKNHYVKDPP VQLSIDSSSA  180
YEIEEDTDGV WSIVGGKASC RRNFSLDVTL MGNFSRPITE EVEVVASLVY ADDGAPVEKP  240
VDDEAPLLTN YDGIEYASSD RPSKVISGRA SFKLKISQLS SKCDNRLFCI RFEIPKMGNY  300
PFLEVFSRPI RCISRNRNTR AASLMLRKSS LGIHLLNGSQ SPILEDGSSD LPCIVREAKQ  360
SPSSKRVKLG QEKLCANFKD DFVLQQANGE SKSHSWISED NNAYPNSLVA RPVSHGGAQN  420
FSSDSENSET TNSGIDDFPS NRDPISDVDV FKYCLGDPNE RRLLLKEMAM SAKEEELATF  480
AERVSLFSGC SHHRHQISIS KRLIEEGIKC WNFISDDNHH VLWENLVSGL QEHFLKMTFG  540
RTRSLTHQDF DLLRRVSGCQ DLVSQDNFEK LWCWLYPIAF TLSQQCITSL WGSAPPVWIE  600
GFITKEEAES SLRGQDPGTF ILRFPTSRSW PHPDSGNLVA TYVGSDYTIH HRLVSLDFIY  660
SSGGKGMTIK PIQDMLLEQP ELGRLGR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G78540.1	0.0	STAT family protein

Link Out ? help Back to Top
Ensembl	OIT00309