PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT00499

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

NAC

Protein Properties

Length: 353aa MW: 40096.1 Da PI: 9.4463

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT00499	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	166.2	1.1e-51	14	139	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvg 101 lppGfrF Ptdeel+v+yL+kkv+g+++++ ++i ++d+yk++Pw Lp+k+ +ekewyfFs+rd+ky++g+r+nr++ +gyWkatg+dk ++s +g++vg OIT00499 14 LPPGFRFYPTDEELLVQYLCKKVAGHDFSM-QIIGDIDLYKFDPWVLPSKALFGEKEWYFFSPRDRKYPNGSRPNRVAGTGYWKATGTDKIITS-QGRKVG 112 79**************************.89***********8777899*******************************9999.999* PP NAM 102 lkktLvfykgrapkgektdWvmheyrl 128 +kk Lvfy g+apkg+kt+W+mheyrl OIT00499 113 IKKALVFYVGKAPKGTKTNWIMHEYRL 139 *************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 353 aa Download sequence
MGVQEKDPLL QLSLPPGFRF YPTDEELLVQ YLCKKVAGHD FSMQIIGDID LYKFDPWVLP 60 SKALFGEKEW YFFSPRDRKY PNGSRPNRVA GTGYWKATGT DKIITSQGRK VGIKKALVFY 120 VGKAPKGTKT NWIMHEYRLF EPSRKNGSTK LDEWVLCRIY KKNSSGQKPH MSGLNSKEHS 180 HGSSTSSSSQ FDDMLESLPE MDHKFSNLSR LNSLKNFQQG EKFNLERLDS ANFDWAILAG 240 LKPMPELGPA NQAPGIQPQA QGHVNNNIHN HNNNNYMNFL NDGYVQPTNF RGNTKVERIN 300 LDEEVESGIR NQGVDKSGFF QQNINGFSQT YTNTVDQFGI QGPNQTLNLG FRP

Sequence ? help Back to Top

Protein Sequence Length: 353 aa Download sequence

MGVQEKDPLL QLSLPPGFRF YPTDEELLVQ YLCKKVAGHD FSMQIIGDID LYKFDPWVLP  60
SKALFGEKEW YFFSPRDRKY PNGSRPNRVA GTGYWKATGT DKIITSQGRK VGIKKALVFY  120
VGKAPKGTKT NWIMHEYRLF EPSRKNGSTK LDEWVLCRIY KKNSSGQKPH MSGLNSKEHS  180
HGSSTSSSSQ FDDMLESLPE MDHKFSNLSR LNSLKNFQQG EKFNLERLDS ANFDWAILAG  240
LKPMPELGPA NQAPGIQPQA QGHVNNNIHN HNNNNYMNFL NDGYVQPTNF RGNTKVERIN  300
LDEEVESGIR NQGVDKSGFF QQNINGFSQT YTNTVDQFGI QGPNQTLNLG FRP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G27410.2	1e-126	NAC family protein

Link Out ? help Back to Top
Ensembl	OIT00499