PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT00508
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family B3
Protein Properties Length: 96aa    MW: 11574.5 Da    PI: 8.6935
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT00508genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B332.81.2e-10581386
              EE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS
        B3  3 kvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86
               vl++ ++ k++ + +pk+f +++     es  + +   +g+ W +++  + +++r ++++GWk  v  n++k g  + F+l++
  OIT00508  5 EVLVKDSYIKQDYMHIPKHFYDHIP----ESHSIAVLRYDGEPWFMEI--NMGKRR-WFKDGWKYVVMNNNIKRGCLIKFELVE 81
              68899999*************6664....34479999***********..777666.79**********************875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 96 aa     Download sequence    
NPSFEVLVKD SYIKQDYMHI PKHFYDHIPE SHSIAVLRYD GEPWFMEINM GKRRWFKDGW  60
KYVVMNNNIK RGCLIKFELV EITQLCVVFQ LHVKGQ