PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT00509
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family B3
Protein Properties Length: 93aa    MW: 11283.2 Da    PI: 8.6941
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT00509genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B333.29.2e-11481286
              EEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS
        B3  2 fkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86
              f vl++ ++ k++ + +pk+f +++ +   ++    +   +g+ W +++  + +++r ++++GWk Fv  n++k g  + ++l++
  OIT00509  4 FEVLMKDSYIKQDYMHIPKHFYDHIPE---SH-STAVLRYNGEPWFMEI--NMGKRR-WFKDGWKYFVMNNNIKRGCLIKLELVE 81
              468899999*************66642...33.3555667*********..777666.79****************999888764 PP
Sequence ? help Back to Top
Protein Sequence    Length: 93 aa     Download sequence    
NPSFEVLMKD SYIKQDYMHI PKHFYDHIPE SHSTAVLRYN GEPWFMEINM GKRRWFKDGW  60
KYFVMNNNIK RGCLIKLELV EITQLCVVFQ PQL