PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT00683
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family B3
Protein Properties Length: 120aa    MW: 14182.1 Da    PI: 4.7914
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT00683genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B335.41.9e-111797189
              EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS
        B3  1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89
              f+ v ++ ++ + + l++p+k  ++       +++  l + +g++W v +  + +++r  +++GWk Fv +n +k g +v F+l++ s+
  OIT00683 17 FEVV-MTDSYINYDDLYIPRKIYKHLP----LTVETALLHYRGKEWFVSM--SVGDRR-RFKEGWKLFVLDNYVKRGFVVKFMLVDVSS 97
              4444.5666666667*******95555....457899*************..555444.4899********************987655 PP
Sequence ? help Back to Top
Protein Sequence    Length: 120 aa     Download sequence    
LTYSCTSEDE EENPPTFEVV MTDSYINYDD LYIPRKIYKH LPLTVETALL HYRGKEWFVS  60
MSVGDRRRFK EGWKLFVLDN YVKRGFVVKF MLVDVSSLYV DFNVEVKGEG THDRNPVEID
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06220.14e-07B3 family protein