PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT00818

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

G2-like

Protein Properties

Length: 217aa MW: 24730.6 Da PI: 5.6542

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT00818	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	89.7	2.6e-28	27	81	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr rWt e H++Fveav++LGG+ +AtPk+i++lm+ +++t +h+kSHLQkYR OIT00818 27 KPRFRWTVEVHDHFVEAVNELGGPFEATPKNIMKLMDDEDITSDHIKSHLQKYRQ 81 79****************************************************6 PP
2	Myb_DNA-binding	40.5	6.4e-13	31	80	3	48
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 rWT e ++ +v+av++lGg+ t+k I++ m + t ++ks++qky+ OIT00818 31 RWTVEVHDHFVEAVNELGGPfeaTPKNIMKLMDdEDITSDHIKSHLQKYR 80 8************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 217 aa Download sequence
MEESSKEQKG EETSEKAVVQ SHDLNRKPRF RWTVEVHDHF VEAVNELGGP FEATPKNIMK 60 LMDDEDITSD HIKSHLQKYR QSKDIISTPK ASKVKRSEKN EAAAHMWHDK GEMQMIRKTF 120 NTEIDMQGRS NMSLEVTNEA EEIVRHEMQA DASAKIELQT KEGSSKLKTY ADQSEGSKKI 180 SKFSTSEKEE LDLNVSPVAD PDQESGRYCD TTKIKGI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G18240.2	3e-20	G2-like family protein

Link Out ? help Back to Top
Ensembl	OIT00818