PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT01022

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

TALE

Protein Properties

Length: 705aa MW: 77013.5 Da PI: 6.6518

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT01022	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.9	1.9e-09	393	430	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ +++ LAk++gLt +qV++WF N R + OIT01022 393 FEHflHPYPKDSDKMMLAKQTGLTRSQVSNWFINARVR 430 554459******************************88 PP
2	BELL	113.5	1.1e-36	257	328	1	72
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 erqe+q+kkakL+++l+eV++rY++y++q+q vis e++ag+gsak Yt+lAl++iS++FrcLkdai++qi OIT01022 257 ERQEIQMKKAKLVNMLDEVEQRYRHYHQQMQSVISWLEQAAGIGSAKTYTALALQTISKQFRCLKDAITGQI 328 79*********************************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 705 aa Download sequence
MAAYFHGNSE IQGGNDGLQT LILMNPAGYV GFSETQHHQP PAGGSNLVFF NSNPPGNSLN 60 IPHAPPSSQQ QFVGIPLATS AFTAPSSSQD GTTTPTVHSH HDISALHGFL ARSHEYGFYN 120 QSNDITEARE ATRAQQQGLS LSLSSQQPGF GNFRPEREEL MTTVSPTAGG GSSSSASAVQ 180 SVPLSPKYLK AAQELLDEVV NVGKAVKTST TDEDVNDGQK SKNNGESSGN MATAAAAGQE 240 GGESNSKRDG AELSTAERQE IQMKKAKLVN MLDEVEQRYR HYHQQMQSVI SWLEQAAGIG 300 SAKTYTALAL QTISKQFRCL KDAITGQIRS ASKTLGEEDS FRGKIEGSRL KFVDNQIRQQ 360 RALQQLGMIQ HNAWRPQRGL PERAVSVLRA WLFEHFLHPY PKDSDKMMLA KQTGLTRSQV 420 SNWFINARVR LWKPMVEEMY LEEIKEQEQN GSDLEKTSKL GEQNEDSTSR SIAPQEKSPR 480 SDSQNKSFLS KQDNNLENLN PASTIPISNT TSISPTGLSI RNNTGFNLIG SPEIKSINIG 540 QGSPKKPRSN EMLHSPNSVP SISMDVKPNE EQMLIKFGDD RQNRDGFSLM GGPTNFMGGF 600 GSYPIGEIGR FSTEQFSAPY STSGTVSLTL ALPHSENLSM SATHHSFLPI PTQSIQMGRG 660 VEIDEANEFG SLNTPTSAHS TSVYENFNIQ TRKRFAAPLL PDFVA

Sequence ? help Back to Top

Protein Sequence Length: 705 aa Download sequence

MAAYFHGNSE IQGGNDGLQT LILMNPAGYV GFSETQHHQP PAGGSNLVFF NSNPPGNSLN  60
IPHAPPSSQQ QFVGIPLATS AFTAPSSSQD GTTTPTVHSH HDISALHGFL ARSHEYGFYN  120
QSNDITEARE ATRAQQQGLS LSLSSQQPGF GNFRPEREEL MTTVSPTAGG GSSSSASAVQ  180
SVPLSPKYLK AAQELLDEVV NVGKAVKTST TDEDVNDGQK SKNNGESSGN MATAAAAGQE  240
GGESNSKRDG AELSTAERQE IQMKKAKLVN MLDEVEQRYR HYHQQMQSVI SWLEQAAGIG  300
SAKTYTALAL QTISKQFRCL KDAITGQIRS ASKTLGEEDS FRGKIEGSRL KFVDNQIRQQ  360
RALQQLGMIQ HNAWRPQRGL PERAVSVLRA WLFEHFLHPY PKDSDKMMLA KQTGLTRSQV  420
SNWFINARVR LWKPMVEEMY LEEIKEQEQN GSDLEKTSKL GEQNEDSTSR SIAPQEKSPR  480
SDSQNKSFLS KQDNNLENLN PASTIPISNT TSISPTGLSI RNNTGFNLIG SPEIKSINIG  540
QGSPKKPRSN EMLHSPNSVP SISMDVKPNE EQMLIKFGDD RQNRDGFSLM GGPTNFMGGF  600
GSYPIGEIGR FSTEQFSAPY STSGTVSLTL ALPHSENLSM SATHHSFLPI PTQSIQMGRG  660
VEIDEANEFG SLNTPTSAHS TSVYENFNIQ TRKRFAAPLL PDFVA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35940.1	1e-151	TALE family protein

Link Out ? help Back to Top
Ensembl	OIT01022