PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT01028
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family bHLH
Protein Properties Length: 165aa    MW: 19096.4 Da    PI: 6.5093
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT01028genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.95e-103878954
              HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
       HLH  9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
               r RR+ri ++f  L++l+P        K++ +++Le+A++Y+k L
  OIT01028 38 ARERRHRISDRFKILQSLIPGG-----SKMDTVTMLEEAIHYVKFL 78
              699*****************95.....5****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 165 aa     Download sequence    
MDQQHSTCFS SSSKINDKEK KKKRSVVKLS TDPQSVAARE RRHRISDRFK ILQSLIPGGS  60
KMDTVTMLEE AIHYVKFLKT QIWLHQTMIN IIDDYDNPNY HHPLLMAHDS IFANYYPHEN  120
NPTPVENAQI NYNLDQLQLP GYAVSDGDQF QGEETNISGD AFMYY