PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT01040
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 250aa    MW: 27995.3 Da    PI: 4.6192
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT01040genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.41.2e-2099149155
       AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
               ++y+GVr+++ +grW+AeIrdp+    r kr++lg+++t+eeAa  +++a+  l+g
  OIT01040  99 KKYRGVRQRP-WGRWAAEIRDPT----RgKRVWLGTYDTPEEAATVYDRAAVMLKG 149
               59********.**********84....35*********************988876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 250 aa     Download sequence    
MILQPPVKFS EHLVTTNKQV HELNMKNPQK VVRIILTDGD ATDSSDDEDD QFMVRRVKRY  60
VTKINFTLLP ESPKQESQPQ QSSRKRCLPS SDSDVGCRKK YRGVRQRPWG RWAAEIRDPT  120
RGKRVWLGTY DTPEEAATVY DRAAVMLKGP DAVTNFALVS PAIETSEAES IIVSPAKTEV  180
SSKDVALSPT SVLRSDDFGP FDGSLGFSEV DAFGFEIDSP FGLTGFGMSE KYFAEEFSEF  240
DFDDFAVEVT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G23750.11e-29ERF family protein