PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT01335

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

TCP

Protein Properties

Length: 213aa MW: 22677.7 Da PI: 8.8896

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT01335	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	111.4	1.3e-34	56	128	5	76
TCP 5 kdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eae 76 ++++++hTkv+gR+RRvR++a+caar+F+L++eLG+ +d++tieWLl+ a+pai+++tgt++ ++ ++ +++ OIT01335 56 ASSNKDRHTKVNGRGRRVRMPALCAARVFQLTKELGHRTDGETIEWLLRHAEPAIIAATGTGTVPSGHViTTA 128 5789*********************************************************888885554222 PP

Sequence ? help Back to Top
Protein Sequence Length: 213 aa Download sequence
MGSEIVLHHN FTPPPTKSTG AVDVAGSGGI NSVSNDNNAL VVGPKKKHSL STRIAASSNK 60 DRHTKVNGRG RRVRMPALCA ARVFQLTKEL GHRTDGETIE WLLRHAEPAI IAATGTGTVP 120 SGHVITTAES VPLSRSPPSI LAPVSRDQPV SGFPVSGGIF SMTPPPSCRL DLYQPALEFS 180 GNEYRHMPFT ALLLQPVTAD DGEKKVACED ENK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37000.1	7e-40	TCP family protein

Link Out ? help Back to Top
Ensembl	OIT01335