PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT01651
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NF-YA
Protein Properties Length: 275aa    MW: 30781.5 Da    PI: 9.7458
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT01651genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA103.32.2e-32140196158
  CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                d p+YVNaKQy++I++RRq Rakle+++kl  k+rkpylheSRh hA++R RgsgGrF
   OIT01651 140 DGPIYVNAKQYHGIMRRRQIRAKLEAQNKL-VKNRKPYLHESRHLHAVNRVRGSGGRF 196
                57****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 275 aa     Download sequence    
MNKKLHINFL PQKVVFPSPC CQEMKSLDPN LQGETLRLTH STINSQDEMT TSEKTNSQDQ  60
CASSEYVHDE RYGRDMQAQI KPALFSSQNE VAHSTGFSPI GYSDPYMSGL YTAYGPQAFV  120
PQMMGIAPTR VPLPLDLAED GPIYVNAKQY HGIMRRRQIR AKLEAQNKLV KNRKPYLHES  180
RHLHAVNRVR GSGGRFLSSK KVHQSDPNSY PTNSASSQDS VERENSTSAF SSVRKDVNNG  240
VSFQQQPDHR AFGVSSHMAI TMQGNGTQQR APVVR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G17590.27e-42NF-YA family protein