PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT01663
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family HB-other
Protein Properties Length: 146aa    MW: 17594.9 Da    PI: 6.2417
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT01663genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox31.14.1e-102312352
              SS--HHHHHHHHHHCTS-HHHHHHHHHHHH CS
  Homeobox 23 rypsaeereeLAkklgLterqVkvWFqNrR 52
              ++p  + +e+L+++l+L+++q+k+WF N+R
  OIT01663  2 PNPENDVIEKLSEELRLDTNQIKIWFENKR 31
              799**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 146 aa     Download sequence    
MPNPENDVIE KLSEELRLDT NQIKIWFENK RCYIQAQRDK EERENLRLEN SRLLSENLQM  60
NLELRNRLCA TCNPEKQRKI LQDLQNENAI LQAELTIISN MHDHLKENPE RYLLLKHHLR  120
HYDNPSGLDL NLKVECDHSF PRLNWN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G21750.23e-07HD-ZIP family protein