PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT01664
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family HB-other
Protein Properties Length: 168aa    MW: 20058.6 Da    PI: 4.9865
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT01664genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox50.82.9e-16953852
              -HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHH CS
  Homeobox  8 tkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrR 52
              ++eq++ Lee+F + ++p  + +e+L+++l+L+++q+k+WF N+R
  OIT01664  9 SDEQIQKLEEVFSEMPNPENDVIEKLSEELRLDTNQIKIWFENKR 53
              689*****************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 168 aa     Download sequence    
MDSPMGSSSD EQIQKLEEVF SEMPNPENDV IEKLSEELRL DTNQIKIWFE NKRCYIQAQR  60
DKEERENLRL ENSRLLSENL QMNLELRNRL CATCNPEKQR KILQDLQNEN AILQAELTII  120
SNMHDHLKEN PERYLLLKHH LHHYDNPSGL DLNLKVECDH NFPRLNWN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G03260.18e-12HD-ZIP family protein