PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT01666
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family HB-other
Protein Properties Length: 150aa    MW: 17769.1 Da    PI: 5.6059
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT01666genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox31.62.9e-102351952
              HHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHH CS
  Homeobox 19 FeknrypsaeereeLAkklgLterqVkvWFqNrR 52
              F + ++   + +e+L+++lgL+++qVk+WF N+R
  OIT01666  2 FSQMPNSENDVIEKLSEELGLDTNQVKIWFDNKR 35
              78888888999**********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 150 aa     Download sequence    
VFSQMPNSEN DVIEKLSEEL GLDTNQVKIW FDNKRCYIQA QRDKEECENL RVENSKLLSE  60
NLQMSLELKN RLCATCNPKK QRKLLEDLQN ENAILQAELT IISKMHDNLK ENPERYLLLK  120
HHLHHYDNPS GLDLDLKVEC DHNFPRLNWN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G73360.13e-13HD-ZIP family protein