PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT01714
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 188aa    MW: 21088.4 Da    PI: 7.8783
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT01714genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.42.1e-192675255
       AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
              +y+GVr ++ +gr++AeIrdp     + +r++lg+f+tae+Aa+a++ a+++++g
  OIT01714 26 RYRGVRKRP-WGRFAAEIRDPI----KkARVWLGTFDTAEDAARAYDDAARAFHG 75
              7********.**********72....35************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 188 aa     Download sequence    
MPRRKNSETN RSTSVAFRHP KTDPNRYRGV RKRPWGRFAA EIRDPIKKAR VWLGTFDTAE  60
DAARAYDDAA RAFHGPKAKT NFSVLPPYGQ NQFENFNWPA SSSLSSTVES SSGARDLHSR  120
VEITRRITPP AVECYSCCDS SSTVVDDNID VDSSSFCKQP LPFDLNLLPP SDDVDDVHVT  180
PCIFSYVN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G03800.11e-19ERF family protein