PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT01770

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

G2-like

Protein Properties

Length: 111aa MW: 12350.7 Da PI: 4.604

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT01770	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	59.8	5.5e-19	2	45	9	51
G2-like 9 eLHerFveaveqLGGs.ekAtPktilelmkvkgLtlehvkSHLQ 51 e H++Fveav++LGG+ +AtPk+i++lm+ +++t h+kSHLQ OIT01770 2 EVHDHFVEAVNELGGPfAEATPKNIMKLMDNEDITSGHIKSHLQ 45 79***********8579*********************** PP
2	Myb_DNA-binding	29.8	1.4e-09	4	47	9	47
HHHHHHHHHHTTTT....-HHHHHHHHT.TTS-HHHHHHHHHHH CS Myb_DNA-binding 9 dellvdavkqlGgg....tWktIartmg.kgRtlkqcksrwqky 47 ++ +v+av++lGg+ t+k I++ m + t ++ks++q OIT01770 4 HDHFVEAVNELGGPfaeaTPKNIMKLMDnEDITSGHIKSHLQVT 47 789**************************************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 111 aa Download sequence
MEVHDHFVEA VNELGGPFAE ATPKNIMKLM DNEDITSGHI KSHLQVTKEA EQKENVEAEE 60 IARQEMQADA AARIELQMKE GKEHLDLNFP AAAPDQDSRN REPKSSGSKN A

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G29000.2	5e-11	G2-like family protein

Link Out ? help Back to Top
Ensembl	OIT01770