PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT02033
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NAC
Protein Properties Length: 286aa    MW: 33377.5 Da    PI: 5.687
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT02033genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM1546.6e-48101381129
       NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgelv 100
               lppGfrF P+deelv++yL +k+++++l    ++ e+d++ +ePw+Lp+ +k +++ewyfFs rd+ky+tg r+nrat sgyWkatgkd+ vl+  ++++v
  OIT02033  10 LPPGFRFCPSDEELVCHYLFNKITNEELIK-GTLVEIDLHICEPWQLPEVTKLNSSEWYFFSFRDRKYTTGFRANRATISGYWKATGKDRIVLDPcTRATV 109
               79*************************655.78***************87788899*************************************9988889* PP

       NAM 101 glkktLvfykgrapkgektdWvmheyrle 129
               g++ktLvfyk+rap+g kt W+mhe+rle
  OIT02033 110 GMRKTLVFYKNRAPNGIKTGWIMHEFRLE 138
               **************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 286 aa     Download sequence    
MDLREIGATL PPGFRFCPSD EELVCHYLFN KITNEELIKG TLVEIDLHIC EPWQLPEVTK  60
LNSSEWYFFS FRDRKYTTGF RANRATISGY WKATGKDRIV LDPCTRATVG MRKTLVFYKN  120
RAPNGIKTGW IMHEFRLENP HIPPKEDWVL CRVFHKAKGE NDNNCTNNLS PQNTYETAVT  180
SPELYNHSLN YDINNQNPPH QSQNSNIIHH HLFDLLVKNH LQLSHQEMNE VSKDETTIHL  240
SKYGQEDDQY GLMFDMDFEV PYLQGEGLHS SLEDMKFDDE NSMVFI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G28530.12e-88NAC family protein