PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT02205
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family B3
Protein Properties Length: 142aa    MW: 16576.9 Da    PI: 5.7001
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT02205genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B330.94.9e-1027104186
               EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS
        B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86 
               f+ v ++ ++ + + l++p+k   +h  ++  +++  l + +g++W v +  + +++r  +++GWk Fv +n  k g +v F+l++
  OIT02205  27 FEVV-MTDSYINYDDLYIPRKIY-KHL-PP--TVDTALLHYRGKEWYVDM--SVGDRR-RFKAGWKVFVLDNYAKRGFTVKFTLVD 104
               4444.5666666667*******9.663.32..367999************..555444.489*********************875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 142 aa     Download sequence    
MDASHSTKRC LTYSSNSEDE EENPPTFEVV MTDSYINYDD LYIPRKIYKH LPPTVDTALL  60
HYRGKEWYVD MSVGDRRRFK AGWKVFVLDN YAKRGFTVKF TLVDVAPLYV DFKVELKGEG  120
TSDNNPVELI RICIVIFYPT IF