PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT02317
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family WOX
Protein Properties Length: 246aa    MW: 27860.1 Da    PI: 8.2159
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT02317genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox62.56.2e-201978357
              --SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
  Homeobox  3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
              +R+++tkeq++ Le+ +++  r+psae++++++ +l    +++ ++V++WFqN++a++++
  OIT02317 19 SRWNPTKEQIDLLESIYRQgIRTPSAEQIQQITLRLrafgHIEGKNVFYWFQNHKARQRQ 78
              6*****************99**************************************97 PP
2Wus_type_Homeobox114.36e-371880365
  Wus_type_Homeobox  3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65
                        +RW+Pt+eQi +Le++y++G+rtP++e+iq+it +L+++G+ie+kNVfyWFQN+kaR+rqkq
           OIT02317 18 GSRWNPTKEQIDLLESIYRQGIRTPSAEQIQQITLRLRAFGHIEGKNVFYWFQNHKARQRQKQ 80
                       58***********************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 246 aa     Download sequence    
MNDDNNSVEM LASDTPVGSR WNPTKEQIDL LESIYRQGIR TPSAEQIQQI TLRLRAFGHI  60
EGKNVFYWFQ NHKARQRQKQ KQDKFAYFNH FLHRTNVFPP PRPNVVCGPY YTPQNNLGFY  120
QQYPVPSLIL PGPGGFKRRA TCDAAVYINA TYSQENSNNM AHLSPNAKQF NHQETLNLFP  180
LHPTGILQEK TTSSSSPSAH DQSTIPSNYT PSNFVEANCF TDLGIGAGDH QVFNFLCGKG  240
PCESQY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G59340.19e-39WOX family protein