PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT02341
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 231aa    MW: 25958 Da    PI: 8.8406
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT02341genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.37.8e-183888155
       AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
              ++y GVr+++ +grWvAeI+d s   ++ r +lg+f+ aeeAa a+++a++ l+g
  OIT02341 38 KKYIGVRQRP-SGRWVAEIKDSS---QKLRLWLGTFDKAEEAALAYDNAARLLRG 88
              59********.7*********42...36***********************9998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 231 aa     Download sequence    
MESSKSPSSE SLNNSSKNIQ EKQVTKTKSK LISSNDGKKY IGVRQRPSGR WVAEIKDSSQ  60
KLRLWLGTFD KAEEAALAYD NAARLLRGRN AKTNFKYQGI LKPNEENCSL LEKNPRLYQL  120
LKLAIMKKLA GNKYQNEIET DQPFVQENMG CDQDKEEICR IQLQGSSSKV YSSVIVAPSF  180
SASITNQSGK KDEEEEENHY QTSAQLFECL FSHANKSSVE NNGLNSSFNV A
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.14e-17ERF family protein