PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT02375
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family B3
Protein Properties Length: 204aa    MW: 23217.1 Da    PI: 4.2993
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT02375genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B344.52.9e-1453140197
               EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
        B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 
               ffkv ++++++k++   +p +f+ e+g +      ++le ++g  W+vkl   ++sg+ +l++GW++F +   +  g f++F+++g+s+f   v +f
  OIT02375  53 FFKVILSPHASKLH---IPDEFMMEYGDN--LRDVVSLEVPNGAIWKVKL--HNCSGMAWLKEGWNKFKEYYSIGCGYFLLFRYTGNSRF--SVFIF 140
               88888888888876...*********987..5558***************..**********************************9999..55555 PP
Sequence ? help Back to Top
Protein Sequence    Length: 204 aa     Download sequence    
MSPDEGIDFS RCSLNNQNFN ITLPHEERTA EKVERRLPEE PKPVDSPETP PQFFKVILSP  60
HASKLHIPDE FMMEYGDNLR DVVSLEVPNG AIWKVKLHNC SGMAWLKEGW NKFKEYYSIG  120
CGYFLLFRYT GNSRFSVFIF DLSASEIDYP PGPNEEEISP GLNEDLTPEN LCVVAEPEEN  180
PLTCQENSCA ETLLMISQPS RPNV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.16e-27B3 family protein