PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT02465
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family G2-like
Protein Properties Length: 405aa    MW: 46045.5 Da    PI: 7.3095
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT02465genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like100.98.5e-32233287155
   G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
               k+r+rWt++LH+rFve+v++LGG++kAtPk+il+lm+ +gLt+ hvkSHLQkYR 
  OIT02465 233 KTRIRWTQDLHDRFVECVNRLGGADKATPKAILKLMESDGLTIFHVKSHLQKYRN 287
               68****************************************************6 PP
2Myb_DNA-binding47.83.4e-15237286348
                      SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 
                      rWT+++++++v++v++lGg    t+k+I + m   g+t  ++ks++qky+
         OIT02465 237 RWTQDLHDRFVECVNRLGGAdkaTPKAILKLMEsDGLTIFHVKSHLQKYR 286
                      9*****************99*****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 405 aa     Download sequence    
MSIQRIGTQE RVPKNSAYPS DYTLEFARMP VQALHAQKQS SSYMGFSLPP ATSAEDVCQQ  60
QQQQQFFPSA NSSSNSTIIG RIGSPSSAFF ATERYLGLTQ YDDQQDNCSQ LSKNYDFQIP  120
SYGFLPDSPA EDFHPKISLP PFIRSQFSTS QPFSPDHQVP YRSPFSSLTE KERILHLKRK  180
LLGEFDTPFD GNQDFSLPHN LCGSHLDYMR QESGFPSANS NNSACSGGSV CNKTRIRWTQ  240
DLHDRFVECV NRLGGADKAT PKAILKLMES DGLTIFHVKS HLQKYRNAKY IPEPTDGKSE  300
KRNCPNNVSQ IDSKTGMQIK EALQMQLEVQ RRLHEQLEIQ RKLQLRIEEQ GKQLKMIFDQ  360
QQRTTRSLLD TQNSTISTPE HDPSNLYDDM EVLVADNIRF PSKIS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06800.19e-73G2-like family protein