PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT02531
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family B3
Protein Properties Length: 104aa    MW: 12162.3 Da    PI: 8.86
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT02531genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B330.85.3e-101991691
              ..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EE.EEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS
        B3  6 tpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsW.evkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91
              +p+++ k++ l +pk+ +   g+ ++ s++ +l+  +g++W   +           l +GWk+Fv +n+Lk g +++F+l++ +++ 
  OIT02531 19 VPKSYIKRDVLFIPKSIC---GYLPPISVKTMLRC-NGKEWwCSRR----------LVNGWKQFVVDNNLKKGNVLLFELVEATSGA 91
              678888999999999999...55567887777776.5555504333..........899********************99876554 PP
Sequence ? help Back to Top
Protein Sequence    Length: 104 aa     Download sequence    
MNTNVWIEEE FYPWFWMKVP KSYIKRDVLF IPKSICGYLP PISVKTMLRC NGKEWWCSRR  60
LVNGWKQFVV DNNLKKGNVL LFELVEATSG AVIFSVEELG LTNA