PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT02645
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family bHLH
Protein Properties Length: 252aa    MW: 27803.2 Da    PI: 7.5395
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT02645genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH41.32.7e-13187232655
               HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
       HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
               +++Er RR ri +++ +L+el+P+     +k  + a++Le+AveY+k Lq
  OIT02645 187 SIAERVRRTRISDRIRKLQELVPNM----DKQTNTADMLEEAVEYVKFLQ 232
               689*********************7....688*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 252 aa     Download sequence    
MQRGSGGAGG GGSGLSRYCS APATWLEALL ESDTENEVVV NPSSPILHSP NKPPPHPSTT  60
QQQLPVLVKP ETRFTGDPGL FESGGSSNFL RQQSSPAEFL SHINSDGYFS SYGIPSSLNY  120
ISQPIKRPRE DDSESSPRKL SNHLKGEPSG QLRGSGGSLD AEMEKLMDDL VPCKVRAKRG  180
CATHPRSIAE RVRRTRISDR IRKLQELVPN MDKQTNTADM LEEAVEYVKF LQKQIQELME  240
HQKKCTCSEK DH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G35460.17e-57bHLH family protein