PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT02664
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family bHLH
Protein Properties Length: 308aa    MW: 34185.6 Da    PI: 5.4122
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT02664genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH375.9e-12117164355
               HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
       HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
               + h  +Er+RR+r  + f+ L + +P +     kKl+Ka+iLe  ++YI +Lq
  OIT02664 117 QDHLLAERKRRERFTQLFAVLAKSIPGL-----KKLDKASILEDSIKYIGELQ 164
               668899**********************.....9****************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 308 aa     Download sequence    
MENASFNNLE NTTGGEEPFE FKNLLSEMFT SFPNQNPSST SSLMEIPKIA FSSSPNSSTS  60
TNNSSSSPNI ISFGNPESNF VGDEIDYDMI SEKVINMSSS PTTSMPKRIC RSPLQSQDHL  120
LAERKRRERF TQLFAVLAKS IPGLKKLDKA SILEDSIKYI GELQGRVRAL EEAGTTKNTN  180
LIESTSTVQK QYPLAATTSD DNSFLAKNFD ESKPDQNDIK VQILDKNILI GIHCSKEMRS  240
IFTIIAGIME QLHLTIHHIR VTPSNHIALH YISVLAEIDQ NVEIRVQDVE KAFKLALPST  300
SNMPGLAD
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1123128ERKRRE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.13e-24bHLH family protein