PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT02675
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family B3
Protein Properties Length: 94aa    MW: 10549.4 Da    PI: 9.2241
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT02675genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B337.15.4e-1215841894
              --HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS
        B3 18 lpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94
              +pk+ +   g+ ++ s++ +l+  +g++W ++l  + +++r  l +GWk+Fv +n+Lk g +++F+l++ ++++  +
  OIT02675 15 IPKSIC---GYLPPISVKTMLR-CNGKEWALTL--TSGGRRR-LINGWKQFVVDNNLKKGNVLLFELVEATSGSVIF 84
              666666...4455667666655.59********..6666665.556********************99887775555 PP
Sequence ? help Back to Top
Protein Sequence    Length: 94 aa     Download sequence    
MNPEPYLYIV FLQFIPKSIC GYLPPISVKT MLRCNGKEWA LTLTSGGRRR LINGWKQFVV  60
DNNLKKGNVL LFELVEATSG SVIFSVEELG LTNA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.12e-07B3 family protein