PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT02782
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NF-YA
Protein Properties Length: 126aa    MW: 14019.7 Da    PI: 5.1226
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT02782genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA45.23e-141852136
  CBFB_NFYA  1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrk 36
               dep++VNaKQyq+ ++RR+ Rakle+++kl +k+rk
   OIT02782 18 DEPIFVNAKQYQATVRRREYRAKLEAQNKL-SKGRK 52
               79****************************.89887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 126 aa     Download sequence    
MLGPISARVP LPLDYQQDEP IFVNAKQYQA TVRRREYRAK LEAQNKLSKG RKVRVPNVSA  60
WLEDLVESGS PDVTNVQGTP VSDALQLNRQ IMESQSYSTP TCSGISNGSN CDDMDQQQPL  120
NYSAFA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G54160.12e-20NF-YA family protein