PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT02817
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 260aa    MW: 29122.3 Da    PI: 7.7494
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT02817genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.61.4e-1756105255
       AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
               +y+GVr+++ +g+++AeIrdp+    + +r++lg+f tae A  a+++a++k++g
  OIT02817  56 HYRGVRQRP-WGKYAAEIRDPK----KaARVWLGTFETAEAAGIAYDEAALKFKG 105
               7********.**********94....45************************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 260 aa     Download sequence    
MYSAARSQQD MSTMVSVLSQ VIGNTSSTAG NTLSHLSLQN QPQPNLQQGN IERRRHYRGV  60
RQRPWGKYAA EIRDPKKAAR VWLGTFETAE AAGIAYDEAA LKFKGNKAKL NFPERVLAKT  120
EFGYLTTNPQ EQLINIPAAN FLPNCNFKPF SQLQHYPHEL LRTGADSSRF NHISGFDPDI  180
LNTVELANSW LDPPLSSTSI ADSSSMTSLV QQASHDVQQA PSNYQQVDEN IVKFSSLFGN  240
ISSSRPSESS NNWEEFYYQK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61890.15e-40ERF family protein