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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | OIT02834 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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| Family | NAC | ||||||||
| Protein Properties | Length: 338aa MW: 38213.8 Da PI: 7.0183 | ||||||||
| Description | NAC family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | NAM | 182.1 | 1.4e-56 | 5 | 131 | 1 | 129 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvg 101
lppGfrFhPtdeel+++yL++kv++ ++++ ++i++vd++k+ePwdLp+k++ +ekewyfFs +d+ky+tg r+nrat++gyWk+tgkdke+++ +g lvg
OIT02834 5 LPPGFRFHPTDEELITYYLTNKVSDFNFTA-KAIADVDLNKCEPWDLPAKASMGEKEWYFFSLKDRKYPTGLRTNRATEAGYWKTTGKDKEIFR-GGVLVG 103
79*************************999.88***************999999****************************************.****** PP
NAM 102 lkktLvfykgrapkgektdWvmheyrle 129
+kktLvfy+grapkgekt+Wvmheyrle
OIT02834 104 MKKTLVFYRGRAPKGEKTNWVMHEYRLE 131
**************************85 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 338 aa Download sequence |
MEENLPPGFR FHPTDEELIT YYLTNKVSDF NFTAKAIADV DLNKCEPWDL PAKASMGEKE 60 WYFFSLKDRK YPTGLRTNRA TEAGYWKTTG KDKEIFRGGV LVGMKKTLVF YRGRAPKGEK 120 TNWVMHEYRL ETKLGFKPSK EEWVVCRVFH KNSTAKKPQP TSSSPQSEES PNCDMTYTFA 180 NELGDIESPS NFYGLATASN GHNCNNISLQ NYNNENVLNM NLNMNLATAA TREAAISNTL 240 PLLPAAWSSS LLCSNLPSVD SLLLRALQFR GYNNQPREVT TTNTNNYPFI QTQNISHIGN 300 DYNNPNLAVE VPSSSMVSDP VQQQQPQEQS YKLGSNIW |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT3G18400.1 | 5e-99 | NAC family protein | ||||
| Link Out ? help Back to Top | |
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| Ensembl | OIT02834 |
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for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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